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The physical studies and interaction with anti-apoptotic proteins of 2-(bis(cyanomethyl)amino)-2-oxoethyl methacrylate molecule     
Yazarlar
Prof. Dr. Serap YALÇIN AZARKAN Prof. Dr. Serap YALÇIN AZARKAN
Kırşehir Ahi Evran Üniversitesi, Türkiye
Doç. Dr. Emine BABUR ŞAŞ Doç. Dr. Emine BABUR ŞAŞ
Kırşehir Ahi Evran Üniversitesi, Türkiye
Nevin Çankaya
Uşak Üniversitesi, Türkiye
Prof. Dr. Fahriye ERCAN Prof. Dr. Fahriye ERCAN
Kırşehir Ahi Evran Üniversitesi, Türkiye
Prof. Dr. Mustafa KURT Prof. Dr. Mustafa KURT
Kırşehir Ahi Evran Üniversitesi, Türkiye
Özet
In this work 2-(bis(cyanomethyl) amino)-2-oxoethyl methacrylate (CMA2OEM) molecule has been characterized theoretically. First, the potential energy surface has been calculated to find the lowest energy state of the molecule. After the most stable state of the molecule, Mulliken atomic charge and nonlinear-optical properties were investigated. Also in the study, binding poses of CMA2OEM molecule and anti-apoptotic proteins, such as BCL-2, BCL-w, MCL-1, AKT1 and BRAF were investigated. The molecular docking results showed that the most stable complex was obtained with this molecule and BRAF protein. The molecular docking results showed that the most stable complex was obtained with this molecule and serine/threonine-protein kinase protein. This study suggested that molecular docking approach may be a potential tool to identify the hydrogen bond interactions in order to treat a disease. Finally, this new ligand could pave the way to experimental studies.
Anahtar Kelimeler
Mulliken atomic charge | nonlinear-optical properties | molecular docking | anti-apoptotic | CMA2OEM
Makale Türü Özgün Makale
Makale Alt Türü SSCI, AHCI, SCI, SCI-Exp dergilerinde yayımlanan tam makale
Dergi Adı CONDENSED MATTER PHYSICS
Dergi ISSN 1607-324X
Dergi Tarandığı Indeksler SCI-Expanded
Dergi Grubu Q4
Makale Dili İngilizce
Basım Tarihi 01-2019
Cilt No 22
Sayı 3
Sayfalar 33301 / 0
Doi Numarası 10.5488/CMP.22.33301
Makale Linki http://www.icmp.lviv.ua/journal/zbirnyk.99/33301/abstract.html