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Genome-wide comparative analysis of variability and population structure between autochthonous Turkish chicken breeds and commercial hybrid lines   
Yazarlar (10)
Eymen Demir
Akdeniz Üniversitesi, Türkiye
Bahar Argun Karslı
Eskişehir Osmangazi Üniversitesi, Türkiye
Demir Özdemir
Akdeniz Üniversitesi, Türkiye
Ümit Bilginer
Huriye Doğru
Sarp Kaya
Burdur Mehmet Akif Ersoy Üniversitesi, Türkiye
Arş. Gör. Veli ATMACA Arş. Gör. Veli ATMACA
Kırşehir Ahi Evran Üniversitesi, Türkiye
Nimet Tufan
Ebru Demir
Taki Karslı
Eskişehir Osmangazi Üniversitesi, Türkiye
Devamını Göster
Özet
Next-generation sequencing (NGS) technologies have revolutionized livestock genomics by enabling rapid, high-resolution genotyping of local populations with thousands of single nucleotide polymorphisms (SNPs), offering unprecedented accuracy and cost efficiency. This study presents the first comprehensive genomic assessment of the Denizli (DNZ) and Gerze (GRZ) chicken breeds, comparing them to commercial broiler and layer hybrid lines using the double digest restriction-site associated DNA sequencing (ddRADseq) technique. A total of 94,208 bi-allelic SNPs were common between DNZ and GRZ, while 33,284 SNPs were retained among all populations after the quality filtering process. Genetic diversity parameters were higher in native Turkish chicken breeds compared to hybrid lines in which minor allele frequency (MAF) was higher than 0.3 in DNZ and GRZ while it was lower than this value in …
Anahtar Kelimeler
Makale Türü Açık Erişim Özgün Makale
Makale Alt Türü SSCI, AHCI, SCI, SCI-Exp dergilerinde yayınlanan tam makale
Dergi Adı Poultry Science
Dergi ISSN 0032-5791 Wos Dergi Scopus Dergi
Dergi Tarandığı Indeksler SCI-Expanded
Dergi Grubu Q1
Makale Dili Türkçe
Basım Tarihi 07-2025
Cilt No 104
DOI Numarası 10.1016/j.psj.2025.105193
Makale Linki https://doi.org/10.1016/j.psj.2025.105193