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Synthesis, single crystal XRD, DFT, molecular docking studies and antioxidant capacity and antibacterial evaluation of β -phenylethylamine derivative schiff base compound      
Yazarlar (5)
Dr. Öğr. Üyesi Kübra ÖZTÜRK Dr. Öğr. Üyesi Kübra ÖZTÜRK
Türkiye
Ebrar Nur Özkan
Dr. Öğr. Üyesi Çiğdem ER ÇALIŞKAN Dr. Öğr. Üyesi Çiğdem ER ÇALIŞKAN
Türkiye
Dr. Öğr. Üyesi Sertan AYTAÇ Dr. Öğr. Üyesi Sertan AYTAÇ
Kırşehir Ahi Evran Üniversitesi, Türkiye
Doç. Dr. Özlem GÜNDOĞDU AYTAÇ Doç. Dr. Özlem GÜNDOĞDU AYTAÇ
Kırşehir Ahi Evran Üniversitesi, Türkiye
Devamını Göster
Özet
In this study, (E)-5-(((4-(dimethylamino)phenyl)imino)methyl)-2-methoxyphenol (K2) was synthesized and characterized. Its structure was determined by single crystal X-ray diffraction and was shown to belong to the monoclinic C2/c space group. By Hirshfeld surface analysis, the most dominant intermolecular interactions were found to be H···· H (%54,5), H···· C/C··· H (%25,2) and H···· O/O··· H (%12,4). The total surface area was calculated as 320.95 Ų. The geometry and reactivity of the molecule were investigated by DFT calculations (B3LYP/631G(d,p)). HOMO and LUMO energy values ​​were determined as -0.2820 eV and -0.11707 eV, respectively, and the energy gap was found as ΔEgap = 0.164 eV. Also, the polarizability was found as 399.94 a.u. and the dipole moment as 4.65 Debye. These theoretical calculations show that K2 can be easily polarized under an electric field and has a permanent dipole moment. Additionally, the antimicrobial and antioxidant properties of the compound were studied. It was found to be effective against Gram-positive and Gram-negative bacteria at a level comparable to Gentamicin and Ciprofloxacin. Furthermore, molecular docking simulations were performed to investigate the interaction of K2 with biologically important proteins (1NHJ, 3QX3, 2XO8 and 1HD2). K2 showed the strongest interaction with Human Peroxiredoxin 5 (1HD2) with a binding energy of -7.45 kcal/mol, suggesting that it may have antioxidant properties and may be a potential therapeutic candidate for oxidative stress-related diseases.
Anahtar Kelimeler
Antibacterial | Antioxidant | DFT | Molecular docking | Single Crystal XRD
Makale Türü Özgün Makale
Makale Alt Türü SSCI, AHCI, SCI, SCI-Exp dergilerinde yayınlanan tam makale
Dergi Adı Journal of Molecular Structure
Dergi ISSN 0022-2860 Wos Dergi Scopus Dergi
Dergi Tarandığı Indeksler SCI-Expanded
Dergi Grubu Q2
Makale Dili Türkçe
Basım Tarihi 06-2025
Cilt No 1344
Sayı 143011
Doi Numarası 10.1016/j.molstruc.2025.143011
Makale Linki https://doi.org/10.1016/j.molstruc.2025.143011