Present and Future Salmonid Cytogenetics
Yazarlar (7)
Prof. Dr. Muhammet GAFFAROĞLU
Kırşehir Ahi Evran Üniversitesi, Türkiye
Czech Academy of Sciences, Çek Cumhuriyeti
Technical University of Munich, Almanya
Czech Academy of Sciences, Çek Cumhuriyeti
Bartın Üniversitesi, Türkiye
Okinawa Institute of Science & Technology Graduate University, Japonya
Czech Academy of Sciences, Çek Cumhuriyeti
| Makale Türü |
Özgün Makale
(SSCI, AHCI, SCI, SCI-Exp dergilerinde yayınlanan tam makale)
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| Dergi Adı | GENES | ||
| Dergi ISSN | 2073-4425 Wos Dergi Scopus Dergi | ||
| Dergi Tarandığı Indeksler | SCI-Expanded | ||
| Makale Dili | Türkçe | Basım Tarihi | 12-2020 |
| Cilt / Sayı / Sayfa | 11 / 12 / 1–19 | DOI | 10.3390/genes11121462 |
| Makale Linki | https://www.mdpi.com/2073-4425/11/12/1462 | ||
| Özet |
| Salmonids are extremely important economically and scientifically; therefore, dynamic developments in their research have occurred and will continue occurring in the future. At the same time, their complex phylogeny and taxonomy are challenging for traditional approaches in research. Here, we first provide discoveries regarding the hitherto completely unknown cytogenetic characteristics of the Anatolian endemic flathead trout, Salmo platycephalus, and summarize the presently known, albeit highly complicated, situation in the genus Salmo. Secondly, by outlining future directions of salmonid cytogenomics, we have produced a prototypical virtual karyotype of Salmo trutta, the closest relative of S. platycephalus. This production is now possible thanks to the high-quality genome assembled to the chromosome level in S. trutta via soft-masking, including a direct labelling of repetitive sequences along the chromosome sequence. Repetitive sequences were crucial for traditional fish cytogenetics and hence should also be utilized in fish cytogenomics. As such virtual karyotypes become increasingly available in the very near future, it is necessary to integrate both present and future approaches to maximize their respective benefits. Finally, we show how the presumably repetitive sequences in salmonids can change the understanding of the overall relationship between genome size and G+C content, creating another outstanding question in salmonid cytogenomics waiting to be resolved. |
| Anahtar Kelimeler |
| chromosome banding | cytotaxonomy of trout | FISH | NOR phenotype | rDNA | Salmo platycephalus |
BM Sürdürülebilir Kalkınma Amaçları
| Atıf Sayıları | |
| WoS | 12 |
| Google Scholar | 17 |